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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924450.1_cds_XP_016472805.1_65002
CDS Infomation

[gene=LOC107794790] [db_xref=GeneID:107794790] [protein=mitochondrial-processing peptidase subunit alpha] [protein_id=XP_016472805.1] [location=complement(join(38176..38228,38512..38624,39318..39367,39468..39538,39743..39815,40787..40884,43038..43104,44162..44242,44371..44538,44647..44814,44897..45193,45296..45532,46905..46943))] [gbkey=CDS]
Sequence

ATGTACAGAATCGCATCTTCTCGCCTCAGCTCTCTTAAGGCACGTCAAGTCAACAGGGTC
TTGACAAGATTTTCAAGTTCAGCTGCTGTTGCAACCAAGCCATCTGGGGGGCTTTTTAGT
TGGCTAACTGGTGAAAAGTCAAGTCAACAGCCTCCTTTGGACTTCCCCCTCAATGATGTT
AAACTCTCAACACCATTACCTGATTATGTTGAACCTGGAAAGACCCAGATAACAACTCTC
GCCAATGGTCTCAAAGTGGCCTCTGAAACATCAGTGAACCCTGCTGCCTCAATCGGCCTA
TATGTTGACTGTGGCTCTATTTACGAGACACCAGCTTCATATGGAGCCACACACCTTTTG
GAACGCATGGCCTTCAAAAGCACATTGAACAGGAGCCACTTGCGTATTGTACGAGAAATT
GAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACGAGAGCATATGATCTACACTTAC
GATGCTTTGAAAACTTATGTACCACAAATGGTGGAGATGCTTGTTGACTGTGTTAGAAAT
CCTGCATTCCTGGATTGGGAAGTTACCGAACAGCTTGAGAAGGTTAAAGCTGAGATTAGT
GAGTACTCCAAAAATCCTCAACACTTGCTTTTGGAGGCAGTTCACTCTGCCGGTTACGCT
GGTCCATACGGGAATTCTCTGATGGCCACAGAAGCTACAATAAACAGGTTGAATAGCACA
GTGCTGGAGGAGTTTGTAGCTGAGAATTATACTGCTCCTCGGATGGTTCTTGCTGCATCT
GGTGTTGAACATGGAGAATTGTTAAAAATTGCAGAACCTCTTCTGTCTGATTTACCTAAG
GTGGCTACTTCTGAGGTGCCGAAACCTGTGTATGTCGGAGGAGATTACCGCCGTCAAGGT
GATGCAGAGATGACCCATTTTGCCCTTGCTTTTGAAGTTCCTGGTGGCTGGATGTCTGAA
AAGGAGTCAATGACTTTAACAGTTCTTCAGATGCTTATGGGAGGAGGTGGATCTTTCTCA
GCTGGAGGTCCTGGAAAAGGGATGTACTCAAGATTATATCTTCGTGTCTTGAATCAGTAC
CCTCAGATTCAAGCATTCTCTGCATTCAGCAGCATTTATAATGACACCGGATTATTTGGA
ATTCAAGCAACTACGACCTCTGATTTTGGGCCACAAGCTGTTGATTTAGCAGTTAAGGAG
CTTATCGCAATAGCAAACCCTGGAGAAGTTGATCAGGTACAGCTAGACCGAGCTAAACAG
TCAACAAAGTCTGCCATTCTGATGAATTTGGAATCTCGGATGGTTGCATCAGAAGATATT
GGCAGACAACTTTTGACATATGGAGAGAGGAAACCAGTGGAGCATTTCTTGAAAGCTATT
GATGCAGTTTCAGCAAAGGATATTGCTTCCGTTGCACAGAAGCTAATTTCGTCGCCTCTG
ACCATGGCATCCTACGGAGATGTTCTTTCCCTCCCGAGTTACGATGCAGTCAGCAACAGG
TTCCATTCCAAATAA

Peptide Sequence

PEP ID

XP_016472805.1
PEP Infomation

PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tabacum]
Sequence

MYRIASSRLSSLKARQVNRVLTRFSSSAAVATKPSGGLFSWLTGEKSSQQPPLDFPLNDV
KLSTPLPDYVEPGKTQITTLANGLKVASETSVNPAASIGLYVDCGSIYETPASYGATHLL
ERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLVDCVRN
PAFLDWEVTEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNST
VLEEFVAENYTAPRMVLAASGVEHGELLKIAEPLLSDLPKVATSEVPKPVYVGGDYRRQG
DAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQY
PQIQAFSAFSSIYNDTGLFGIQATTTSDFGPQAVDLAVKELIAIANPGEVDQVQLDRAKQ
STKSAILMNLESRMVASEDIGRQLLTYGERKPVEHFLKAIDAVSAKDIASVAQKLISSPL
TMASYGDVLSLPSYDAVSNRFHSK

Transcript Sequence

Gene sequence data has not been registered.